eCommerce Accounting: Pros & Cons of Outsourcing

Make sure a proven vendor can handle the unique complexities of eCommerce when outsourcing finance and accounting.
Updated: May 29, 2025

A thriving online marketplace quickly outgrows spreadsheets. Order spikes, multiple sales channels, and cross-border taxes produce a level of complexity most in-house teams weren’t hired, or tooled, to handle.

  • Accurate reconciliation of multi-channel payouts: Amazon, Shopify, PayPal, Klarna, and BNPL platforms all deposit funds on different cadences with multiple fee structures.
  • Sales-tax and VAT sprawl: Compliance with 40-plus state sales-tax thresholds and EU/UK VAT regimes.
  • Board-level metrics on demand: Investors expect insight into contribution margin, cohort LTV/CAC, and cash-conversion cycle.

To keep pace with expansion, high-growth brands weigh the pros and cons of outsourcing finance and accounting and turning the workload to third-party partners.

What You Need to Know

  • eCommerce accounting complexity rises faster than most in-house teams can scale.
  • Outsourcing the back-office frees leadership and internal teams to double down on growth levers and strategy.
  • Providers steeped in eCommerce, like Consero, offer pre-integrated tech stacks, process automation, elastic staffing, and specialized workflows that shorten time to value.
  • Choose an eCommerce-native partner with proven multi-channel expertise and clear escalation paths.
  • Communicate change internally so existing teams see the shift as opportunity, not replacement.

Pros Cons
Frees up 10-15 hours per week for founders to focus on strategic growth activities instead of manual reconciliation tasks. Leaders may feel uncomfortable handing financial data to third parties and worry about losing visibility or control.
Provides audit-ready GAAP books and faster due diligence processes for investors and lenders. Custom systems and legacy ERPs require time-intensive API mapping and onboarding that can delay benefits.
Offers elastic staffing that scales up and down with seasonal demand without hiring headaches or layoffs. Some vendors charge based on order volume or marketplace count, creating unexpected pricing surprises.
Provides enterprise-grade software and tools at startup-friendly costs through bundled monthly fees. Internal teams still need to provide timely approvals and accurate data inputs for outsourced partners to work effectively.
Automates complex tax compliance and subscription billing processes that typically require manual work. Introducing third-party providers may create morale concerns among existing in-house accounting staff.
Delivers investor-ready KPIs and financial reports on demand instead of requiring weeks of preparation.

Pros

More Time for Growth Levers

Every hour a founder spends matching Stripe deposits to Shopify orders is an hour not spent negotiating supplier terms or ad testing.

Handing off day-to-day tasks like bank recs, AP/AR, and expense categorization to the right outsourced accounting partner frees leaders to focus on higher-value work in product, marketing, and partnerships.

For example, Consero’s SIMPL platform automates reconciliation across major gateways, which has helped our eCommerce clients reclaim 10-15 hours per week for strategic work.

GAAP-Ready Books & Due-Diligence Speed

Moving from cash to accrual accounting, tightening controls, and documenting policies are heavy lifts for a small team but essential when courting lenders or buyers.

Outsourced controller teams know how to match marketplace payouts, gift cards, subscriptions, and pre-orders to the correct period—critical for audit-ready books and investor confidence.

Consero’s playbooks have walked brands from cash to GAAP in one quarter, work that helped BigCommerce progress smoothly from VC backing all the way to IPO.

Elastic Staffing for Peak Seasons

If order volume increases twenty-fold from Black Friday or Q4 holiday shopping, but plummets in January, Consero’s Finance as a Service (FaaS) and augmented staffing solutions let you scale headcount up and down as needed without hiring or layoffs, and at a predictable cost structure.

Instead of turnover or overhead headaches, you can tap into a pool of accountants as your processing capacity increases, and revert to steady-state the next month.

Fortune 100 Tech Stack, Startup Cost

ERP or accounting software licenses, BI tools, and reconciliation bots can add six-figure overhead. 

Outsourced models like FaaS bundle enterprise-grade software into a single monthly fee, with Consero also handling your data integration.

Consero maps ops systems to the GL, automates the billing process, and removes the need to license and maintain disparate tools.

Automated Tax & Subscription Billing Compliance

Marketplace sellers often struggle to map operational data to the GL, especially for items like usage-based or subscription revenue. 

Consero’s FaaS solution for eCommerce integrates Avalara’s AvaTax for sales tax automation and can automate billing data outside the GL, eliminating manual work.

Investor-Ready KPIs on Demand

Boards want LTV/CAC, cash burn, and contribution margin in one click. Consero’s integrated dashboard lets you see your complete financial position in near real-time, generate custom financial reports, and turn around detailed reports in days instead of weeks.

Rather than scrambling to produce investor-grade financials, outsourced teams can quickly turnaround the metrics you need, when you need them.

Weekly cash-forecast models and operational dashboards also give leadership the confidence to raise spend or throttle back in near-real time. Consero delivers these views out-of-the-box.

Turn Your F&A Department into a Strategic Growth Engine

Get the playbook we use to help hundreds of growing businesses streamline their back-office.

Schedule Consultation

Cons

Perceived Loss of Control

Handing financial data to a third party can feel risky, and leaders may worry about access or visibility gaps.

You should work with providers that offer 24/7 dashboard access and explicit user roles. 

Consero’s client portal creates role-based dashboards for increased internal controls and lets teams download the full GL or backup docs anytime,

Integration & Onboarding Effort

Custom checkout flows or legacy ERPs take time for API mapping. Entrusting outsourced accounting partners who lack deep familiarity with eCommerce can lead to onboarding delays that stall benefits.

Vet potential partners for demonstrated eCommerce success via referrals from industry peers.

Outsourced solutions like Consero’s Flex Finance, where outsourced accounting teams operate within your existing general ledge (NetSuite, QuickBooks, etc.), can shorten ramp-up.

Volume-based pricing surprises

Some vendors link fees to order volumes or up-charge for additional marketplaces; review pricing tiers carefully. 

With Consero, pricing is pre-determined based on employee headcount and business complexity (ex., number of entities), so you have a more predictable cost structure.

Ongoing Internal Oversight Needed

Although outsourcers will handle the majority of the tactical operations, they still rely on timely PO approvals and accurate product-cost inputs from your team.

Team Morale Concerns

Bringing in a third-party may make an in-house team uneasy.

Position the partner as an extension handling transactional work so employees can focus on higher-value priorities.

Regular meetings and consistent communication between in-house and outsourced teams also help foster a collaborative dynamic.

Not Ideal for Hyper-Niche Models

Brands with complex, build-to-order bundles or on-site audit needs may require a hybrid or fully in-house model.

Is Outsourcing Right for Your Business?

Start by auditing your pain points. Are closes late and sales-tax notices piling up faster than your team can handle? 

Outsourcing makes sense when you need a cost-effective solution, investor-ready, GAAP books, automated multi-state tax compliance, and the ability to flex finance capacity up or down faster than you can hire.

Think twice if you require full on-site control, operate a highly customized build-to-order model that defies standard workflows, or have stable, predictable volume that an existing internal team already handles well.

For brands leaning toward the first camp, Consero’s tailored eCommerce offerings, proven with companies ranging from over-$400 million market cap enterprises to sub-$10 million sellers, can provide the talent, technology, and processes you need to scale with confidence.

When you work with a capable partner, outsourcing transforms finance and accounting from a bottleneck into a real-time command center that fuels faster product launches, better margins, and confident scaling. 

Get in touch today to turn your finance and accounting function into a growth engine.

Related Resources

ArticlePrivate Equity Solutions

How Private Equity Firms Maximize Portfolio Value by Outsourcing Finance & Accounting

To strengthen and continuously improve their private equity portfolio, private equity firms need to go beyond the traditional role of being a mere provider of ...
Man in dress shirt next to man in blazer in hallway
Finance as a ServiceNonprofit

How A Nonprofit CEO Leveraged Finance as a Service

Kelsey Louie, CEO of The Door, a youth services nonprofit, discusses how Finance as a Service (FaaS) transformed the organization's financial management, operational efficiency, and ...
Case Study

Consero helps Managed Services Organization deliver “investment grade” financials

RMS Healthcare is the Managed Services Organization (MSO) that manages the Med First network of clinics. RMS knew its potential as a leading MSO but ...
The Ultimate Guide to Finance as a Service
ArticleCFO Support

The Ultimate Guide to Finance as a Service

Finance as a Service (FaaS) can provide organizations with enhanced reliability, timeliness, and quality insight into their financial performance. This solution empowers SMBs to focus ...
Back Office Holding Back 3
CEO / CFO

3 digital tools to aid mergers and acquisitions

Mergers and acquisitions are unavoidable in the modern economy. The Institute for Mergers, Acquisitions and Alliances reported more than 50,000 such transactions occurred in 2017, ...
Blue and yellow text with Consero logo and abstract blue design
Events and WebinarsOutsourcing

How Outsourcing Helped Two CFOs Transform the Finance Function [Webinar]

Investor-backed CFOs share how Finance as a Service transformed their finance functions and delivered remarkable cost savings.

Finance as a Service

Cutting edge technology, processes, and people in a fully-managed solution to deliver precise financial visibility and improved operational scalability, plus a lower and more predictable cost structure. 

Flex Finance

Keep your existing technology and processes. We can manage the back-office F&A function from end-to-end process, including closing the books. When you need skilled talent, we can supplement your F&A team.

Advisory Services

Expert advice and strategies to help you grow.

• CFO Advisory Services
• FP&A and Reporting
• Technical Accounting & Clean-Up

Consero FaaS: Disrupting the Outdated Traditional F&A Model

Transformation
  • Cash to GAAP conversion
  • Clean-up work
  • Interim oversight & support
  • Accounting software Implementation

Build it Yourself Solution

  • CFO / Interim CFO
  • Consultants / VARs

Consero FaaS Solution

  • CFO / Interim CFO
  • or Consero Interim CFO
  • Consero Setup/Transformation
Ongoing F&A
  • Monthly financials
  • Daily accounting support
  • Management reporting
  • Integrate add-on acquisitions

Build it Yourself Solution

  • CFO
  • Controllers & Accounting Team
  • Enterprise Accounting Applications

Consero FaaS Solution

  • CFO
  • or Consero Fractional CFO
  • Consero FaaS Enterprise F&A Software and Services

New PE Platform Investment F&A Challenges

Founder Owned Company Accounting:
  • Existing accounting done on a cash/hybrid basis
  • Run on SMB accounting software and other disparate applications
  • Inability to produce auditable financials
  • Lack of know-how to develop projections & KPIs
  • No consistency/structure to customer contracts
  • Underqualified staff
  • Non-scalable manual processes
Carve-Out Accounting:
  • Required to move off parent company accounting applications in a timely fashion
  • Have to build an entire F&A team
  • No documented operational policies and procedures
To Optimized Finance & Accounting:
  • Monthly financials available in 5-10 business days
  • Audit and diligence ready support details
  • Integrated enterprise grade accounting software
  • Budget and forecast reporting
  • Business KPIs
  • Efficient & scalable processes for rolling in add-ons